To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("spliceSites")
In most cases, you don't need to download the package archive at all.
Bioconductor version: Release (3.5)
Performs splice centered analysis on RNA-seq data.
Author: Wolfgang Kaisers
Maintainer: Wolfgang Kaisers <kaisers at med.uni-duesseldorf.de>
Citation (from within R,
enter citation("spliceSites")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("spliceSites")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("spliceSites")
R Script | spliceSites | |
Reference Manual | ||
Text | NEWS |
biocViews | DifferentialExpression, GeneExpression, Proteomics, RNAseq, Software |
Version | 1.24.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (4 years) |
License | GPL-2 |
Depends | methods, rbamtools (>= 2.14.3), refGenome (>= 1.6.0), Biobase, Biostrings(>= 2.28.0) |
Imports | BiocGenerics, doBy, seqLogo, IRanges |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | spliceSites_1.24.0.tar.gz |
Windows Binary | spliceSites_1.24.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | spliceSites_1.24.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/spliceSites |
Package Short Url | http://bioconductor.org/packages/spliceSites/ |
Package Downloads Report | Download Stats |
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