To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("nethet")
In most cases, you don't need to download the package archive at all.
Bioconductor version: Release (3.5)
Package nethet is an implementation of statistical solid methodology enabling the analysis of network heterogeneity from high-dimensional data. It combines several implementations of recent statistical innovations useful for estimation and comparison of networks in a heterogeneous, high-dimensional setting. In particular, we provide code for formal two-sample testing in Gaussian graphical models (differential network and GGM-GSA; Stadler and Mukherjee, 2013, 2014) and make a novel network-based clustering algorithm available (mixed graphical lasso, Stadler and Mukherjee, 2013).
Author: Nicolas Staedler, Frank Dondelinger
Maintainer: Nicolas Staedler <staedler.n at gmail.com>, Frank Dondelinger <fdondelinger.work at gmail.com>
Citation (from within R,
enter citation("nethet")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("nethet")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("nethet")
R Script | nethet | |
Reference Manual | ||
Text | NEWS |
biocViews | Clustering, GraphAndNetwork, Software |
Version | 1.8.0 |
In Bioconductor since | BioC 3.1 (R-3.2) (2.5 years) |
License | GPL-2 |
Depends | |
Imports | glasso, mvtnorm, parcor, GeneNet, huge, CompQuadForm, ggm, mclust, parallel, GSA, limma, multtest, ICSNP, glmnet, network, ggplot2 |
LinkingTo | |
Suggests | knitr, xtable, BiocStyle |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | nethet_1.8.0.tar.gz |
Windows Binary | nethet_1.8.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | nethet_1.8.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/nethet |
Package Short Url | http://bioconductor.org/packages/nethet/ |
Package Downloads Report | Download Stats |
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