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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("globalSeq")
In most cases, you don't need to download the package archive at all.
globalSeq
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Testing for association between RNA-Seq and high-dimensional data
Bioconductor version: Release (3.5)
The method may be conceptualised as a test of overall significance in regression analysis, where the response variable is overdispersed and the number of explanatory variables exceeds the sample size.
Author: Armin Rauschenberger [aut, cre]
Maintainer: Armin Rauschenberger <a.rauschenberger at vumc.nl>
Citation (from within R,
enter citation("globalSeq")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("globalSeq")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("globalSeq")
| R Script | globalSeq | |
| HTML | pkgdown | |
| HTML | pkgdown | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | DifferentialExpression, DimensionReduction, ExomeSeq, ExonArray, GeneExpression, GenomeWideAssociation, MultipleComparison, RNASeq, Regression, Sequencing, Software, Transcriptomics, WholeGenome, miRNA |
| Version | 1.4.2 |
| In Bioconductor since | BioC 3.3 (R-3.3) (1.5 years) |
| License | GPL-3 |
| Depends | R (>= 3.0.0) |
| Imports | |
| LinkingTo | |
| Suggests | knitr, testthat, SummarizedExperiment |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/rauschenberger/globalSeq |
| BugReports | https://github.com/rauschenberger/globalSeq/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | globalSeq_1.4.2.tar.gz |
| Windows Binary | globalSeq_1.4.2.zip |
| Mac OS X 10.11 (El Capitan) | globalSeq_1.4.2.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/globalSeq |
| Package Short Url | http://bioconductor.org/packages/globalSeq/ |
| Package Downloads Report | Download Stats |
Documentation »
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