To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("DeepBlueR")
In most cases, you don't need to download the package archive at all.
Bioconductor version: Release (3.5)
Accessing the DeepBlue Epigenetics Data Server through R.
Author: Felipe Albrecht, Markus List
Maintainer: Felipe Albrecht <felipe.albrecht at mpi-inf.mpg.de>, Markus List <markus.list at mpi-inf.mpg.de>
Citation (from within R,
enter citation("DeepBlueR")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("DeepBlueR")
HTML | R Script | The DeepBlue epigenomic data server - R package |
Reference Manual | ||
Text | NEWS |
biocViews | Annotation, CpGIsland, DNAMethylation, DataImport, DataRepresentation, Epigenetics, GeneRegulation, GenomeAnnotation, Preprocessing, Software, ThirdPartyClient |
Version | 1.2.10 |
In Bioconductor since | BioC 3.4 (R-3.3) (1 year) |
License | GPL (>=2.0) |
Depends | R (>= 3.3), XML, RCurl |
Imports | GenomicRanges, data.table, stringr, diffr, dplyr, methods, rjson, utils, R.utils, foreach, withr, rtracklayer, GenomeInfoDb, settings, filehash |
LinkingTo | |
Suggests | knitr, rmarkdown, LOLA, Gviz, gplots, ggplot2, tidyr, RColorBrewer, matrixStats |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | DeepBlueR_1.2.10.tar.gz |
Windows Binary | DeepBlueR_1.2.10.zip |
Mac OS X 10.11 (El Capitan) | DeepBlueR_1.2.10.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/DeepBlueR |
Package Short Url | http://bioconductor.org/packages/DeepBlueR/ |
Package Downloads Report | Download Stats |
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