To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons7way.UCSC.hg38")

In most cases, you don't need to download the package archive at all.

phastCons7way.UCSC.hg38

 

   

UCSC phastCons conservation scores for hg38

Bioconductor version: Release (3.4)

Store UCSC phastCons conservation scores for the human genome (hg38) calculated from multiple alignments with other 6 vertebrate species.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("phastCons7way.UCSC.hg38")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phastCons7way.UCSC.hg38")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews AnnotationData, Genetics, Homo_sapiens, PhastConsDb
Version 3.4.0
License Artistic-2.0
Depends R (>= 3.0.0), VariantFiltering(>= 1.9.14)
Imports utils, IRanges, GenomicRanges, BSgenome
LinkingTo
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SystemRequirements
Enhances
URL
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source phastCons7way.UCSC.hg38_3.4.0.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Package Short Url http://bioconductor.org/packages/phastCons7way.UCSC.hg38/
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