To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("annaffy")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.4)
Functions for handling data from Bioconductor Affymetrix annotation data packages. Produces compact HTML and text reports including experimental data and URL links to many online databases. Allows searching biological metadata using various criteria.
Author: Colin A. Smith <colin at colinsmith.org>
Maintainer: Colin A. Smith <colin at colinsmith.org>
Citation (from within R,
enter citation("annaffy")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("annaffy")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("annaffy")
R Script | annaffy Primer | |
Reference Manual |
biocViews | Annotation, GO, Microarray, OneChannel, Pathways, ReportWriting, Software |
Version | 1.46.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 12 years) |
License | LGPL |
Depends | R (>= 2.5.0), methods, Biobase, GO.db, KEGG.db |
Imports | AnnotationDbi(>= 0.1.15), DBI |
LinkingTo | |
Suggests | hgu95av2.db, multtest, tcltk |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | a4Base, a4Reporting, PGSEA, webbioc |
Imports Me | |
Suggests Me | AffyExpress, ArrayTools, BiocCaseStudies, oneChannelGUI |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | annaffy_1.46.0.tar.gz |
Windows Binary | annaffy_1.46.0.zip |
Mac OS X 10.9 (Mavericks) | annaffy_1.46.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/annaffy/tree/release-3.4 |
Package Short Url | http://bioconductor.org/packages/annaffy/ |
Package Downloads Report | Download Stats |
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