To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CNORdt")
In most cases, you don't need to download the package archive at all.
CNORdt
|
|
|
|
|
|
|
|
Add-on to CellNOptR: Discretized time treatments
Bioconductor version: Release (3.4)
This add-on to the package CellNOptR handles time-course data, as opposed to steady state data in CellNOptR. It scales the simulation step to allow comparison and model fitting for time-course data. Future versions will optimize delays and strengths for each edge.
Author: A. MacNamara
Maintainer: A. MacNamara <aidan.macnamara at ebi.ac.uk>
Citation (from within R,
enter citation("CNORdt")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CNORdt")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CNORdt")
| R Script | Using multiple time points to train logic models to data | |
| Reference Manual |
Details
| biocViews | CellBasedAssays, CellBiology, Proteomics, Software, TimeCourse |
| Version | 1.16.0 |
| In Bioconductor since | BioC 2.11 (R-2.15) (4.5 years) |
| License | GPL-2 |
| Depends | R (>= 1.8.0), CellNOptR(>= 0.99), abind |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | CNORdt_1.16.0.tar.gz |
| Windows Binary | CNORdt_1.16.0.zip (32- & 64-bit) |
| Mac OS X 10.9 (Mavericks) | CNORdt_1.16.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/CNORdt/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/CNORdt/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
