- Home
- Bioconductor 3.3
- Experiment Packages
- etec16s
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("etec16s")
In most cases, you don't need to download the package archive at all.
etec16s
|
|
|
|
|
|
Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment
Bioconductor version: Release (3.3)
16S rRNA gene sequencing data to study changes in the faecal microbiota of 12 volunteers during a human challenge study with ETEC (H10407) and subsequent treatment with ciprofloxacin.
Author: Joseph N. Paulson
Maintainer: Joseph N. Paulson <jpaulson at jimmy.harvard.edu>
Citation (from within R,
enter citation("etec16s")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("etec16s")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("etec16s")
| R Script | etec16s | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | ExperimentData, MicrobiomeData, SequencingData |
| Version | 1.0.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.3), Biobase, metagenomeSeq(>= 1.12.0) |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | etec16s_1.0.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/etec16s/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
