BiocHail

This is the development version of BiocHail; for the stable release version, see BiocHail.

basilisk and hail


Bioconductor version: Development (3.21)

Use hail via basilisk when appropriate, or via reticulate. This package can be used in terra.bio to interact with UK Biobank resources processed by hail.is.

Author: Vincent Carey [aut, cre] (ORCID: )

Maintainer: Vincent Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("BiocHail")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BiocHail")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews Infrastructure, Software
Version 1.7.0
In Bioconductor since BioC 3.17 (R-4.3) (1.5 years)
License Artistic-2.0
Depends R (>= 4.3.0), graphics, stats, utils
Imports reticulate, basilisk, BiocFileCache, methods, dplyr, BiocGenerics
System Requirements
URL https://github.com/vjcitn/BiocHail
Bug Reports https://github.com/vjcitn/BiocHail/issues
See More
Suggests knitr, testthat, BiocStyle, ggplot2, DT
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/BiocHail
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BiocHail
Package Short Url https://bioconductor.org/packages/BiocHail/
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