Informeasure
R implementation of information measures
Bioconductor version: Release (3.20)
This package consolidates a comprehensive set of information measurements, encompassing mutual information, conditional mutual information, interaction information, partial information decomposition, and part mutual information.
Author: Chu Pan [aut, cre]
Maintainer: Chu Pan <chu.pan at hnu.edu.cn>
Citation (from within R, enter
citation("Informeasure")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Informeasure")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Informeasure")| Informeasure: a tool to quantify nonlinear dependence between variables in biological regulatory networks from an information theory perspective | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | GeneExpression, Network, NetworkInference, Software |
| Version | 1.16.0 |
| In Bioconductor since | BioC 3.12 (R-4.0) (4 years) |
| License | Artistic-2.0 |
| Depends | R (>= 4.0) |
| Imports | entropy |
| System Requirements | |
| URL | https://github.com/chupan1218/Informeasure |
| Bug Reports | https://github.com/chupan1218/Informeasure/issues |
See More
| Suggests | knitr, BiocStyle, rmarkdown, testthat (>= 3.0.0), SummarizedExperiment |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Informeasure_1.16.0.tar.gz |
| Windows Binary (x86_64) | Informeasure_1.16.0.zip (64-bit only) |
| macOS Binary (x86_64) | Informeasure_1.16.0.tgz |
| macOS Binary (arm64) | Informeasure_1.15.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Informeasure |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Informeasure |
| Bioc Package Browser | https://code.bioconductor.org/browse/Informeasure/ |
| Package Short Url | https://bioconductor.org/packages/Informeasure/ |
| Package Downloads Report | Download Stats |