- Home
- Bioconductor 3.2
- Experiment Packages
- RIPSeekerData
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")
In most cases, you don't need to download the package archive at all.
RIPSeekerData
|
test data for RIPSeeker
Bioconductor version: 3.2
The RIP-seq data in BAM format are the test data for the package RIPSeeker. The data correspond to two RIP-seq experiments, namely PRC2 and CCNT1. Raw data from NCBI Gene Expression Omnibus under accession numbers GSE17064 for PRC2 and in-house for CCNT1.
Author: Yue Li
Maintainer: Alejandro Reyes <reyes at embl.de>
Citation (from within R,
enter citation("RIPSeekerData")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RIPSeekerData")
| RIP-seq datasets for testing RIPSeeker package | ||
| Reference Manual |
Details
| biocViews | ExperimentData, GEO, Genome, RIPSeqData, SequencingData, StemCell |
| Version | 1.6.0 |
| License | GPL-2 |
| Depends | RIPSeeker |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | RIPSeekerData_1.6.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/RIPSeekerData/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
