To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("tweeDEseq")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
Differential expression analysis of RNA-seq using the Poisson-Tweedie family of distributions.
Author: Juan R Gonzalez <jrgonzalez at creal.cat> and Mikel Esnaola <mesnaola at creal.cat> (with contributions from Robert Castelo <robert.castelo at upf.edu>)
Maintainer: Juan R Gonzalez <jrgonzalez at creal.cat>
Citation (from within R,
enter citation("tweeDEseq")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("tweeDEseq")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("tweeDEseq")
tweeDEseq: analysis of RNA-seq data using the Poisson-Tweedie family of distributions | ||
Reference Manual |
biocViews | DifferentialExpression, RNASeq, Sequencing, Software, StatisticalMethod |
Version | 1.16.0 |
In Bioconductor since | BioC 2.9 (R-2.14) (4.5 years) |
License | GPL (>= 2) |
Depends | R (>= 2.12.0) |
Imports | MASS, limma, edgeR, parallel, cqn |
LinkingTo | |
Suggests | tweeDEseqCountData, xtable |
SystemRequirements | |
Enhances | |
URL | http://www.creal.cat/jrgonzalez/software.htm |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | tweeDEseq_1.16.0.tar.gz |
Windows Binary | tweeDEseq_1.16.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | tweeDEseq_1.16.0.tgz |
Mac OS X 10.9 (Mavericks) | tweeDEseq_1.16.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/tweeDEseq/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/tweeDEseq/ |
Package Downloads Report | Download Stats |
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