- Home
- Bioconductor 3.2
- Software Packages
- pkgDepTools
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pkgDepTools")
In most cases, you don't need to download the package archive at all.
pkgDepTools
|
Package Dependency Tools
Bioconductor version: 3.2
This package provides tools for computing and analyzing dependency relationships among R packages. It provides tools for building a graph-based representation of the dependencies among all packages in a list of CRAN-style package repositories. There are also utilities for computing installation order of a given package. If the RCurl package is available, an estimate of the download size required to install a given package and its dependencies can be obtained.
Author: Seth Falcon
Maintainer: Seth Falcon <seth at userprimary.net>
Citation (from within R,
enter citation("pkgDepTools")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pkgDepTools")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pkgDepTools")
| How to Use pkgDepTools | ||
| Reference Manual |
Details
| biocViews | GraphAndNetwork, Infrastructure, Software |
| Version | 1.36.0 |
| In Bioconductor since | BioC 1.9 (R-2.4) (9.5 years) |
| License | GPL-2 |
| Depends | methods, graph, RBGL |
| Imports | graph, RBGL |
| LinkingTo | |
| Suggests | Biobase, Rgraphviz, RCurl, BiocInstaller |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | pkgDepTools_1.36.0.tar.gz |
| Windows Binary | pkgDepTools_1.36.0.zip |
| Mac OS X 10.6 (Snow Leopard) | pkgDepTools_1.36.0.tgz |
| Mac OS X 10.9 (Mavericks) | pkgDepTools_1.36.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/pkgDepTools/tree/release-3.2 |
| Package Short Url | http://bioconductor.org/packages/pkgDepTools/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
