To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pdmclass")

In most cases, you don't need to download the package archive at all.

pdmclass

   

Classification of Microarray Samples using Penalized Discriminant Methods

Bioconductor version: 3.2

This package can be used to classify microarray data using one of three penalized regression methods; partial least squares, principal components regression, or ridge regression.

Author: James W. MacDonald, Debashis Ghosh, based in part on pls code of Mike Denham

Maintainer: James W. MacDonald <jmacdon at u.washington.edu>

Citation (from within R, enter citation("pdmclass")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pdmclass")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("pdmclass")

 

PDF pdmclass Overview
PDF   Reference Manual

Details

biocViews Classification, Software
Version 1.42.0
In Bioconductor since BioC 1.7 (R-2.2) (10.5 years)
License Artistic-2.0
Depends Biobase(>= 1.4.22), R (>= 1.9.0), fibroEset, mda
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me oneChannelGUI
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source pdmclass_1.42.0.tar.gz
Windows Binary pdmclass_1.42.0.zip
Mac OS X 10.6 (Snow Leopard) pdmclass_1.42.0.tgz
Mac OS X 10.9 (Mavericks) pdmclass_1.42.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/pdmclass/tree/release-3.2
Package Short Url http://bioconductor.org/packages/pdmclass/
Package Downloads Report Download Stats

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