To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("lmdme")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
linear ANOVA decomposition of Multivariate Designed Experiments implementation based on limma lmFit. Features: i)Flexible formula type interface, ii) Fast limma based implementation, iii) p-values for each estimated coefficient levels in each factor, iv) F values for factor effects and v) plotting functions for PCA and PLS.
Author: Cristobal Fresno and Elmer A. Fernandez
Maintainer: Cristobal Fresno <cfresno at bdmg.com.ar>
Citation (from within R,
enter citation("lmdme")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("lmdme")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("lmdme")
lmdme: linear model framework for PCA/PLS analysis of ANOVA decomposition on Designed Multivariate Experiments in R | ||
Reference Manual | ||
Text | NEWS |
biocViews | Cancer, DifferentialExpression, ExperimentData, Microarray, OneChannel, Software, TwoChannel, Visualization |
Version | 1.12.0 |
In Bioconductor since | BioC 2.11 (R-2.15) (3.5 years) |
License | GPL (>=2) |
Depends | R (>= 2.14.1), pls, stemHypoxia |
Imports | stats, methods, limma |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | parallel |
URL | http://www.bdmg.com.ar/?page_id=38 |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | lmdme_1.12.0.tar.gz |
Windows Binary | lmdme_1.12.0.zip |
Mac OS X 10.6 (Snow Leopard) | lmdme_1.12.0.tgz |
Mac OS X 10.9 (Mavericks) | lmdme_1.12.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/lmdme/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/lmdme/ |
Package Downloads Report | Download Stats |
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