To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("lapmix")
In most cases, you don't need to download the package archive at all.
lapmix
|
Laplace Mixture Model in Microarray Experiments
Bioconductor version: 3.2
Laplace mixture modelling of microarray experiments. A hierarchical Bayesian approach is used, and the hyperparameters are estimated using empirical Bayes. The main purpose is to identify differentially expressed genes.
Author: Yann Ruffieux, contributions from Debjani Bhowmick, Anthony C. Davison, and Darlene R. Goldstein
Maintainer: Yann Ruffieux <yann.ruffieux at epfl.ch>
Citation (from within R,
enter citation("lapmix")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("lapmix")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("lapmix")
| lapmix example | ||
| Reference Manual |
Details
| biocViews | DifferentialExpression, Microarray, OneChannel, Software |
| Version | 1.36.0 |
| In Bioconductor since | BioC 1.9 (R-2.4) (9.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.6.0), stats |
| Imports | Biobase, graphics, grDevices, methods, stats, tools, utils |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://www.r-project.org http://www.bioconductor.org http://stat.epfl.ch |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | lapmix_1.36.0.tar.gz |
| Windows Binary | lapmix_1.36.0.zip |
| Mac OS X 10.6 (Snow Leopard) | lapmix_1.36.0.tgz |
| Mac OS X 10.9 (Mavericks) | lapmix_1.36.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/lapmix/tree/release-3.2 |
| Package Short Url | http://bioconductor.org/packages/lapmix/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
