To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("gaucho")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: 3.2
Use genetic algorithms to determine the relationship between clones in heterogenous populations such as cancer sequencing samples
Author: Alex Murison [aut, cre], Christopher Wardell [aut, cre]
Maintainer: Alex Murison <Alexander.Murison at icr.ac.uk>, Christopher Wardell <Christopher.Wardell at icr.ac.uk>
Citation (from within R,
enter citation("gaucho")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("gaucho")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("gaucho")
An introduction to gaucho | ||
Reference Manual | ||
Text | NEWS |
biocViews | Genetics, SNP, Sequencing, Software, SomaticMutation |
Version | 1.6.0 |
In Bioconductor since | BioC 2.14 (R-3.1) (2 years) |
License | GPL-3 |
Depends | R (>= 3.0.0), compiler, GA, graph, heatmap.plus, png, Rgraphviz |
Imports | |
LinkingTo | |
Suggests | knitr |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | gaucho_1.6.0.tar.gz |
Windows Binary | gaucho_1.6.0.zip |
Mac OS X 10.6 (Snow Leopard) | gaucho_1.6.0.tgz |
Mac OS X 10.9 (Mavericks) | gaucho_1.6.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/gaucho/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/gaucho/ |
Package Downloads Report | Download Stats |
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