- Home
- Bioconductor 3.2
- Software Packages
- Imetagene
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Imetagene")
In most cases, you don't need to download the package archive at all.
Imetagene
|
A graphical interface for the metagene package
Bioconductor version: 3.2
This package provide a graphical user interface to the metagene package. This will allow people with minimal R experience to easily complete metagene analysis.
Author: Audrey Lemacon <audrey.lemacon.1 at ulaval.ca>, Charles Joly Beauparlant <charles.joly-beauparlant at crchul.ulaval.ca>, Arnaud Droit <arnaud.droit at crchuq.ulaval.ca>
Maintainer: Audrey Lemacon <audrey.lemacon.1 at ulaval.ca>
Citation (from within R,
enter citation("Imetagene")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Imetagene")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Imetagene")
| HTML | Imetagene: the iteractive interface for metagene | |
| Reference Manual | ||
| Text | NEWS | |
| Text | LICENSE |
Details
| biocViews | Alignment, ChIPSeq, Coverage, Genetics, MultipleComparison, Sequencing, Software |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (0.5 years) |
| License | Artistic-2.0 | file LICENSE |
| Depends | R (>= 3.2.0), metagene, shiny |
| Imports | d3heatmap, shinyBS, shinyFiles, shinythemes, ggplot2 |
| LinkingTo | |
| Suggests | knitr, BiocStyle, rmarkdown |
| SystemRequirements | |
| Enhances | |
| URL | |
| BugReports | https://github.com/andronekomimi/Imetagene/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | Imetagene_1.0.0.tar.gz |
| Windows Binary | Imetagene_1.0.0.zip |
| Mac OS X 10.6 (Snow Leopard) | Imetagene_1.0.0.tgz |
| Mac OS X 10.9 (Mavericks) | Imetagene_1.0.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/Imetagene/tree/release-3.2 |
| Package Short Url | http://bioconductor.org/packages/Imetagene/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
