UCSCRepeatMasker
UCSC RepeatMasker AnnotationHub resource metadata
Bioconductor version: Release (3.19)
Store UCSC RepeatMasker AnnotationHub resource metadata. Provide provenance and citation information for UCSC RepeatMasker AnnotationHub resources. Illustrate in a vignette how to access those resources.
Author: Robert Castelo [aut, cre], Beatriz Calvo [ctb]
Maintainer: Robert Castelo <robert.castelo at upf.edu>
Citation (from within R, enter
citation("UCSCRepeatMasker")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("UCSCRepeatMasker")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("UCSCRepeatMasker")| UCSC RepeatMasker AnnotationHub Resource Metadata | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | AnnotationData, AnnotationHub |
| Version | 3.15.2 |
| License | Artistic-2.0 |
| Depends | AnnotationHub, GenomeInfoDb |
| Imports | XML, RCurl |
| System Requirements | |
| URL |
See More
| Suggests | knitr, rmarkdown, BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | UCSCRepeatMasker_3.15.2.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Package Short Url | https://bioconductor.org/packages/UCSCRepeatMasker/ |
| Package Downloads Report | Download Stats |