plasFIA

DOI: 10.18129/B9.bioc.plasFIA  

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.17 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see plasFIA.

FIA-HRMS plasma dataset

Bioconductor version: Release (3.17)

Positive Ionization FIA-HRMS data of human plasma spiked with a pool of 40 compounds acquired in FIA-HRMS mode on an orbitrap fusion. plasFIA also include the result of the processing by the proFIA package with adapted parameters for an Orbitrap Fusion.

Author: Alexis Delabriere, Etienne Thevenot, Ulli Hohenester and Christophe Junot.

Maintainer: Alexis Delabriere <alexis.delabriere at outlook.fr>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("plasFIA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	ExperimentData, MassSpectrometryData
Version	1.28.0
License	LGPL
Depends	proFIA
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	proFIA
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/plasFIA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/plasFIA
Package Short Url	https://bioconductor.org/packages/plasFIA/
Package Downloads Report	Download Stats