Bioconductor version: Release (3.17)
Differential expression analysis of RNA-seq using the Poisson-Tweedie family of distributions.
Author: Dolors Pelegri-Siso [aut, cre] , Juan R. Gonzalez [aut] , Mikel Esnaola [aut], Robert Castelo [aut]
Maintainer: Dolors Pelegri-Siso <dolors.pelegri at isglobal.org>
Citation (from within R,
enter citation("tweeDEseq")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("tweeDEseq")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("tweeDEseq")
R Script | tweeDEseq: analysis of RNA-seq data using the Poisson-Tweedie family of distributions | |
Reference Manual |
biocViews | DNASeq, DifferentialExpression, ImmunoOncology, RNASeq, Sequencing, Software, StatisticalMethod |
Version | 1.46.2 |
In Bioconductor since | BioC 2.9 (R-2.14) (12 years) |
License | GPL (>= 2) |
Depends | R (>= 4.3.0) |
Imports | Rcpp (>= 1.0.10), MASS, limma, edgeR, parallel, cqn, grDevices, graphics, stats, utils |
LinkingTo | Rcpp |
Suggests | tweeDEseqCountData, xtable |
SystemRequirements | |
Enhances | |
URL | https://github.com/isglobal-brge/tweeDEseq/ |
BugReports | https://github.com/isglobal-brge/tweeDEseq/issues |
Depends On Me | |
Imports Me | ptmixed |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | tweeDEseq_1.46.2.tar.gz |
Windows Binary | tweeDEseq_1.46.2.zip (64-bit only) |
macOS Binary (x86_64) | tweeDEseq_1.46.2.tgz |
macOS Binary (arm64) | tweeDEseq_1.46.2.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/tweeDEseq |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/tweeDEseq |
Bioc Package Browser | https://code.bioconductor.org/browse/tweeDEseq/ |
Package Short Url | https://bioconductor.org/packages/tweeDEseq/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.17 | Source Archive |
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