Bioconductor version: Release (3.17)
Plotting functions, frameshift detection and parsing of sequencing data from ribosome profiling experiments.
Author: Thomas J. Hardcastle
Maintainer: Thomas J. Hardcastle <tjh48 at cam.ac.uk>
Citation (from within R,
enter citation("riboSeqR")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("riboSeqR")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | Genetics, RiboSeq, Sequencing, Software, Visualization |
Version | 1.34.0 |
In Bioconductor since | BioC 3.0 (R-3.1) (9 years) |
License | GPL-3 |
Depends | R (>= 3.0.2), methods, GenomicRanges, abind |
Imports | Rsamtools, IRanges, baySeq, GenomeInfoDb, seqLogo |
LinkingTo | |
Suggests | BiocStyle, RUnit, BiocGenerics |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
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Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/riboSeqR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/riboSeqR |
Package Short Url | https://bioconductor.org/packages/riboSeqR/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.17 | Source Archive |
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