Bioconductor version: Release (3.17)
This package provides the infrastructure and tools to import, query and perform basic analysis of whole body plethysmography and metabolism data. Currently support is limited to data derived from Buxco respirometry instruments as exported by their FinePointe software.
Author: Daniel Bottomly [aut, cre], Marty Ferris [ctb], Beth Wilmot [aut], Shannon McWeeney [aut]
Maintainer: Daniel Bottomly <bottomly at ohsu.edu>
Citation (from within R,
enter citation("plethy")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("plethy")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | DataImport, DataRepresentation, Infastructure, Software, TimeCourse, biocViews |
Version | 1.37.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (10 years) |
License | GPL-3 |
Depends | R (>= 3.1.0), methods, DBI (>= 0.5-1), RSQLite (>= 1.1), BiocGenerics, S4Vectors |
Imports | Streamer, IRanges, reshape2, plyr, RColorBrewer, ggplot2, Biobase |
LinkingTo | |
Suggests | RUnit, BiocStyle |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | plethy_1.37.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/plethy |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/plethy |
Bioc Package Browser | https://code.bioconductor.org/browse/plethy/ |
Package Short Url | https://bioconductor.org/packages/plethy/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.17 | Source Archive |
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