This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.17 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see pkgDepTools.
Bioconductor version: Release (3.17)
This package provides tools for computing and analyzing dependency relationships among R packages. It provides tools for building a graph-based representation of the dependencies among all packages in a list of CRAN-style package repositories. There are also utilities for computing installation order of a given package. If the RCurl package is available, an estimate of the download size required to install a given package and its dependencies can be obtained.
Author: Seth Falcon [aut], Bioconductor Package Maintainer [cre]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("pkgDepTools")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("pkgDepTools")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | GraphAndNetwork, Infrastructure, Software |
Version | 1.66.0 |
In Bioconductor since | BioC 1.9 (R-2.4) (17 years) |
License | GPL-2 |
Depends | methods, graph, RBGL |
Imports | graph, RBGL |
LinkingTo | |
Suggests | Biobase, Rgraphviz, RCurl, BiocManager |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | pkgDepTools_1.66.0.zip (64-bit only) |
macOS Binary (x86_64) | |
macOS Binary (arm64) | pkgDepTools_1.65.1.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/pkgDepTools |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/pkgDepTools |
Package Short Url | https://bioconductor.org/packages/pkgDepTools/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.17 | Source Archive |
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