crisprVerse

DOI: 10.18129/B9.bioc.crisprVerse  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see crisprVerse.

Easily install and load the crisprVerse ecosystem for CRISPR gRNA design

Bioconductor version: 3.16

The crisprVerse is a modular ecosystem of R packages developed for the design and manipulation of CRISPR guide RNAs (gRNAs). All packages share a common language and design principles. This package is designed to make it easy to install and load the crisprVerse packages in a single step. To learn more about the crisprVerse, visit .

Author: Jean-Philippe Fortin [aut, cre]

Maintainer: Jean-Philippe Fortin <fortin946 at gmail.com>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("crisprVerse")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("crisprVerse")

 

HTML	R Script	crisprVerse
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	CRISPR, FunctionalGenomics, GeneTarget, Software
Version	1.0.0
In Bioconductor since	BioC 3.16 (R-4.2) (< 6 months)
License	MIT + file LICENSE
Depends	R (>= 4.2.0)
Imports	BiocManager, cli, crisprBase, crisprBowtie, crisprScore, crisprDesign, crisprViz, rlang, tools, utils
LinkingTo
Suggests	BiocStyle, knitr, testthat
SystemRequirements
Enhances
URL	https://github.com/crisprVerse/crisprVerse
BugReports	https://github.com/crisprVerse/crisprVerse/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	crisprVerse_1.0.0.tar.gz
Windows Binary	crisprVerse_1.0.0.zip
macOS Binary (x86_64)	crisprVerse_1.0.0.tgz
macOS Binary (arm64)	crisprVerse_1.0.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/crisprVerse
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/crisprVerse
Bioc Package Browser	https://code.bioconductor.org/browse/crisprVerse/
Package Short Url	https://bioconductor.org/packages/crisprVerse/
Package Downloads Report	Download Stats