biodbExpasy

DOI: 10.18129/B9.bioc.biodbExpasy  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see biodbExpasy.

biodbExpasy, a library for connecting to Expasy ENZYME database.

Bioconductor version: 3.16

The biodbExpasy library provides access to Expasy ENZYME database, using biodb package framework. It allows to retrieve entries by their accession number. Web services can be accessed for searching the database by name or comments.

Author: Pierrick Roger [aut, cre]

Maintainer: Pierrick Roger <pierrick.roger at cea.fr>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("biodbExpasy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biodbExpasy")

 

HTML	R Script	Introduction to the biodbExpasy package.
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataImport, Infrastructure, Software
Version	1.2.0
In Bioconductor since	BioC 3.15 (R-4.2) (1 year)
License	AGPL-3
Depends	R (>= 4.1)
Imports	biodb(>= 1.3.1), R6, stringr, chk
LinkingTo
Suggests	roxygen2, BiocStyle, testthat (>= 2.0.0), devtools, knitr, rmarkdown, covr, lgr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	biodbExpasy_1.2.0.tar.gz
Windows Binary	biodbExpasy_1.2.0.zip
macOS Binary (x86_64)	biodbExpasy_1.2.0.tgz
macOS Binary (arm64)	biodbExpasy_1.2.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/biodbExpasy
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/biodbExpasy
Bioc Package Browser	https://code.bioconductor.org/browse/biodbExpasy/
Package Short Url	https://bioconductor.org/packages/biodbExpasy/
Package Downloads Report	Download Stats