MANOR

DOI: 10.18129/B9.bioc.MANOR  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see MANOR.

CGH Micro-Array NORmalization

Bioconductor version: 3.16

Importation, normalization, visualization, and quality control functions to correct identified sources of variability in array-CGH experiments.

Author: Pierre Neuvial <pierre.neuvial at math.cnrs.fr>, Philippe Hupé <philippe.hupe at curie.fr>

Maintainer: Pierre Neuvial <pierre.neuvial at math.cnrs.fr>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MANOR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MANOR")

 

HTML	R Script	Overview of the MANOR package
PDF		Reference Manual
Text		NEWS

Details

biocViews	CopyNumberVariation, DataImport, Microarray, Normalization, Preprocessing, QualityControl, Software, TwoChannel
Version	1.70.0
In Bioconductor since	BioC 1.7 (R-2.2) (17.5 years)
License	GPL-2
Depends	R (>= 2.10)
Imports	GLAD, graphics, grDevices, stats, utils
LinkingTo
Suggests	knitr, rmarkdown, bookdown
SystemRequirements
Enhances
URL	http://bioinfo.curie.fr/projects/manor/index.html
BugReports	https://github.com/pneuvial/MANOR/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MANOR_1.70.0.tar.gz
Windows Binary	MANOR_1.70.0.zip (64-bit only)
macOS Binary (x86_64)	MANOR_1.70.0.tgz
macOS Binary (arm64)	MANOR_1.70.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MANOR
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MANOR
Bioc Package Browser	https://code.bioconductor.org/browse/MANOR/
Package Short Url	https://bioconductor.org/packages/MANOR/
Package Downloads Report	Download Stats