Bioconductor version: Release (3.15)
Provides two multiplex imaging datasets collected on Vectra instruments at the University of Colorado Anschutz Medical Campus. Data are provided as a Spatial Experiment objects. Data is provided in tabular form and has been segmented and phenotyped using Inform software. Raw .tiff files are not included.
Author: Wrobel Julia [aut, cre] , Tusharkanti Ghosh [aut]
Maintainer: Wrobel Julia <julia.wrobel at cuanschutz.edu>
Citation (from within R,
enter citation("VectraPolarisData")
):
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("VectraPolarisData")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("VectraPolarisData")
HTML | R Script | VectraPolarisData |
Reference Manual | ||
Text | NEWS |
biocViews | ExperimentData, ExperimentHub, Homo_sapiens_Data, ReproducibleResearch, SingleCellData, SpatialData |
Version | 1.0.0 |
License | Artistic-2.0 |
Depends | ExperimentHub, SpatialExperiment, utils |
Imports | |
LinkingTo | |
Suggests | BiocStyle, knitr, rmarkdown, dplyr |
SystemRequirements | |
Enhances | |
URL | https://github.com/julia-wrobel/VectraPolarisData |
BugReports | https://support.bioconductor.org/t/VectraPolarisData |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | VectraPolarisData_1.0.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
Source Repository | git clone https://git.bioconductor.org/packages/VectraPolarisData |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/VectraPolarisData |
Package Short Url | https://bioconductor.org/packages/VectraPolarisData/ |
Package Downloads Report | Download Stats |
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