Bioconductor version: Release (3.15)
Single-cell RNA-seq data for on PBMC cells, generated by 10X Genomics.
Author: Kasper D. Hansen [aut], Davide Risso [aut], Milan Malfait [ctb], Jeroen Gilis [ctb], Theodore Killian [ctb], Murat Cem Kose [ctb], Chong Tang [ctb], Teun van den Brand [ctb], Dania Machlab [ctb], Stephanie Hicks [aut, cre]
Maintainer: Stephanie Hicks <shicks19 at jhu.edu>
Citation (from within R,
enter citation("TENxPBMCData")
):
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("TENxPBMCData")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TENxPBMCData")
HTML | R Script | Obtaining scRNA-seq data on PBMCs from 10X Genomics |
Reference Manual |
biocViews | ExperimentData, ExperimentHub, ExpressionData, RNASeqData, SequencingData, SingleCellData |
Version | 1.14.0 |
License | CC BY 4.0 |
Depends | SingleCellExperiment, HDF5Array |
Imports | AnnotationHub, ExperimentHub |
LinkingTo | |
Suggests | rmarkdown, knitr, BiocStyle, snow, BiocFileCache, BiocParallel |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | OSCA.multisample |
Imports Me | singleCellTK |
Suggests Me | ASURAT, celda, ExperimentSubset, fcoex, glmGamPoi, iSEE, mbkmeans, schex, scone, scry, transformGamPoi |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | TENxPBMCData_1.14.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
Source Repository | git clone https://git.bioconductor.org/packages/TENxPBMCData |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TENxPBMCData |
Package Short Url | https://bioconductor.org/packages/TENxPBMCData/ |
Package Downloads Report | Download Stats |
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