Bioconductor version: Release (3.15)
The package provide RNA-seq count for 2 strains of mus musclus; Wild type and Ob/Ob. Each strain was divided into two groups, and each group received either chow diet or high fat diet. RNA expression was measured after 20 weeks in 7 tissues.
Author: Omar Elashkar [aut, cre] , Mahmoud Ahmed [aut]
Maintainer: Omar Elashkar <omar.i.elashkar at gmail.com>
Citation (from within R,
enter citation("ObMiTi")
):
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("ObMiTi")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ObMiTi")
HTML | R Script | Using ObMiTi |
Reference Manual | ||
Text | NEWS |
biocViews | ExperimentData, ExperimentHub, GEO, RNASeqData |
Version | 1.4.0 |
License | GPL-3 |
Depends | R (>= 4.1), SummarizedExperiment, ExperimentHub |
Imports | |
LinkingTo | |
Suggests | knitr, rmarkdown, BiocManager, GenomicFeatures, S4Vectors, devtools, testthat |
SystemRequirements | |
Enhances | |
URL | https://github.com/OmarElAshkar/ObMiTi |
BugReports | https://github.com/OmarElAshkar/ObMiTi/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | ObMiTi_1.4.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
Source Repository | git clone https://git.bioconductor.org/packages/ObMiTi |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ObMiTi |
Package Short Url | https://bioconductor.org/packages/ObMiTi/ |
Package Downloads Report | Download Stats |
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