BeadSorted.Saliva.EPIC

DOI: 10.18129/B9.bioc.BeadSorted.Saliva.EPIC    

Illumina EPIC data on BeadSorted adult saliva cells

Bioconductor version: Release (3.15)

Raw data objects used to estimate saliva cell proportion estimates in ewastools. The FlowSorted.Saliva.EPIC object is constructed from saples assayed by Lauren Middleton et. al. (2021).

Author: Jonah Fisher [aut, cre], Kelly Bakulski [aut], Lauren Middleton [aut]

Maintainer: Jonah Fisher <jazzfish at umich.edu>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BeadSorted.Saliva.EPIC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BeadSorted.Saliva.EPIC")

 

HTML	R Script	BeadSorted.Saliva.EPIC.html
PDF		Reference Manual

Details

biocViews	ExperimentData, ExperimentHub, Genome, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version	1.4.0
License	GPL-3
Depends	R (>= 4.1), minfi(>= 1.36.0), ExperimentHub
Imports
LinkingTo
Suggests	knitr, rmarkdown
SystemRequirements
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URL
Depends On Me
Imports Me
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BeadSorted.Saliva.EPIC_1.4.0.tar.gz
Windows Binary
macOS Binary (x86_64)
Source Repository	git clone https://git.bioconductor.org/packages/BeadSorted.Saliva.EPIC
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/BeadSorted.Saliva.EPIC
Package Short Url	https://bioconductor.org/packages/BeadSorted.Saliva.EPIC/
Package Downloads Report	Download Stats