phastCons100way.UCSC.hg38

DOI: 10.18129/B9.bioc.phastCons100way.UCSC.hg38    

UCSC phastCons conservation scores for hg38

Bioconductor version: Release (3.15)

Store UCSC phastCons conservation scores for the human genome (hg38) calculated from multiple alignments with other 99 vertebrate species.

Author: Robert Castelo [aut, cre]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("phastCons100way.UCSC.hg38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version	3.7.1
License	Artistic-2.0
Depends	R (>= 3.0.0), GenomicScores(>= 1.3.19)
Imports	utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	primirTSS
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	phastCons100way.UCSC.hg38_3.7.1.tar.gz
Windows Binary
macOS Binary (x86_64)
Package Short Url	https://bioconductor.org/packages/phastCons100way.UCSC.hg38/
Package Downloads Report	Download Stats