paircompviz

DOI: 10.18129/B9.bioc.paircompviz    

Multiple comparison test visualization

Bioconductor version: Release (3.15)

This package provides visualization of the results from the multiple (i.e. pairwise) comparison tests such as pairwise.t.test, pairwise.prop.test or pairwise.wilcox.test. The groups being compared are visualized as nodes in Hasse diagram. Such approach enables very clear and vivid depiction of which group is significantly greater than which others, especially if comparing a large number of groups.

Author: Michal Burda

Maintainer: Michal Burda <michal.burda at osu.cz>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("paircompviz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("paircompviz")

 

PDF	R Script	Using paircompviz
PDF		Reference Manual

Details

biocViews	GraphAndNetwork, Software
Version	1.34.0
In Bioconductor since	BioC 2.13 (R-3.0) (9 years)
License	GPL (>=3.0)
Depends	R (>= 2.10), Rgraphviz
Imports	Rgraphviz
LinkingTo
Suggests	multcomp, reshape, rpart, plyr, xtable
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	paircompviz_1.34.0.tar.gz
Windows Binary	paircompviz_1.34.0.zip
macOS Binary (x86_64)	paircompviz_1.34.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/paircompviz
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/paircompviz
Package Short Url	https://bioconductor.org/packages/paircompviz/
Package Downloads Report	Download Stats