Prostar

DOI: 10.18129/B9.bioc.Prostar    

A GUI for DAPAR package

Bioconductor version: Release (3.15)

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Author: Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]

Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Prostar")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Prostar")

 

PDF	R Script	Prostar User Manual
PDF		Reference Manual
Text		README
Text		NEWS

Details

biocViews	GUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software
Version	1.28.6
In Bioconductor since	BioC 3.2 (R-3.2) (7 years)
License	Artistic-2.0
Depends	R (>= 4.1.0)
Imports	DAPAR(>= 1.28.5), rhandsontable, data.table, shiny, shinyBS, shinyAce, highcharter, MSnbase, shinyWidgets, shinycssloaders, htmlwidgets, RColorBrewer, shinyjqui, later
LinkingTo
Suggests	BiocStyle, BiocManager, testthat, shinyTree, knitr, future, sass, R.utils, gplots, ggplot2, vioplot, promises, colourpicker, tibble, DAPARdata(>= 1.22.2), webshot, shinythemes, XML, gtools, compiler, shinyjs, DT
SystemRequirements
Enhances
URL	http://www.prostar-proteomics.org/
BugReports	https://github.com/prostarproteomics/Prostar/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Prostar_1.28.6.tar.gz
Windows Binary	Prostar_1.28.6.zip
macOS Binary (x86_64)	Prostar_1.28.6.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Prostar
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Prostar
Package Short Url	https://bioconductor.org/packages/Prostar/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.15	Source Archive