Bioconductor version: Release (3.14)
Models and tools for subject level analysis of X chromosome inactivation (XCI) and XCI-escape inference.
Author: Renan Sauteraud, Dajiang Liu
Maintainer: Renan Sauteraud <rxs575 at psu.edu>
Citation (from within R,
enter citation("XCIR")
):
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("XCIR")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | Coverage, RNASeq, Sequencing, Software, StatisticalMethod |
Version | 1.8.0 |
In Bioconductor since | BioC 3.10 (R-3.6) (2.5 years) |
License | GPL-2 |
Depends | methods |
Imports | stats, utils, tools, data.table, Biostrings, IRanges, VariantAnnotation, seqminer, ggplot2, biomaRt, readxl, S4Vectors |
LinkingTo | |
Suggests | knitr, rmarkdown |
SystemRequirements | |
Enhances | |
URL | https://github.com/SRenan/XCIR |
BugReports | https://github.com/SRenan/XCIR/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/XCIR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/XCIR |
Package Short Url | https://bioconductor.org/packages/XCIR/ |
Package Downloads Report | Download Stats |
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: