Bioconductor version: Release (3.14)
Filter genetic variants using different criteria such as inheritance model, amino acid change consequence, minor allele frequencies across human populations, splice site strength, conservation, etc.
Author: Robert Castelo [aut, cre], Dei Martinez Elurbe [ctb], Pau Puigdevall [ctb], Joan Fernandez [ctb]
Maintainer: Robert Castelo <robert.castelo at upf.edu>
Citation (from within R,
enter citation("VariantFiltering")
):
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("VariantFiltering")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("VariantFiltering")
R Script | VariantFiltering: filter coding and non-coding genetic variants | |
Reference Manual | ||
Text | NEWS |
Follow Installation instructions to use this package in your R session.
Source Package | VariantFiltering_1.30.0.tar.gz |
Windows Binary | VariantFiltering_1.30.0.zip (32- & 64-bit) |
macOS 10.13 (High Sierra) | VariantFiltering_1.30.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/VariantFiltering |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/VariantFiltering |
Package Short Url | https://bioconductor.org/packages/VariantFiltering/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.14 | Source Archive |
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