Rdisop

DOI: 10.18129/B9.bioc.Rdisop    

Decomposition of Isotopic Patterns

Bioconductor version: Release (3.14)

Identification of metabolites using high precision mass spectrometry. MS Peaks are used to derive a ranked list of sum formulae, alternatively for a given sum formula the theoretical isotope distribution can be calculated to search in MS peak lists.

Author: Anton Pervukhin <apervukh at minet.uni-jena.de>, Steffen Neumann <sneumann at ipb-halle.de>

Maintainer: Steffen Neumann <sneumann at ipb-halle.de>

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rdisop")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rdisop")

 

PDF		Molecule Identification with Rdisop
PDF		Reference Manual
Text		INSTALL

Details

biocViews	ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version	1.54.0
In Bioconductor since	BioC 2.2 (R-2.7) (14 years)
License	GPL-2
Depends	R (>= 2.0.0), Rcpp
Imports
LinkingTo	Rcpp
Suggests	RUnit
SystemRequirements	None
Enhances
URL	https://github.com/sneumann/Rdisop
BugReports	https://github.com/sneumann/Rdisop/issues/new
Depends On Me
Imports Me	CorMID, enviGCMS, HiResTEC, InterpretMSSpectrum, MetaDBparse
Suggests Me	adductomicsR, MSnbase, RforProteomics
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Rdisop_1.54.0.tar.gz
Windows Binary	Rdisop_1.54.0.zip
macOS 10.13 (High Sierra)	Rdisop_1.54.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Rdisop
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rdisop
Package Short Url	https://bioconductor.org/packages/Rdisop/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.14	Source Archive