fluidigmSC_analyzeGeneDetection {uSORT} | R Documentation |
A gene detection function computes the fraction of genes detected in each cell, reproduced from FluidigmSC package.
fluidigmSC_analyzeGeneDetection(expression_data, threshold = 1)
expression_data |
A data frame containing raw expression values, with rownames of genes and colnames of cells. |
threshold |
A limit of detection in the unit of TPM/CPM/RPMK. |
A data frame containing a column of number of genes detected, and a column of the corresponding percentage of gene detection, rownames of cells.