fullCopiesSummary {twoddpcr}R Documentation

Get all of the counts data in a summarised data frame.

Description

Returns a data frame with all the copies information, plus any optional columns. This function is intended to be used as a final summary of the molecule counts.

Usage

fullCopiesSummary(df, extraCols = NULL)

Arguments

df

A data frame generated by fullCountsSummary.

extraCols

A vector of column names from df to include. If NULL, no extra columns are added. Defaults to NULL.

Value

A data frame with the basic figures, the mutant counts, the wild type counts, the summarised counts, and extraCols if specified. Prints an additional column for notes, indicating whether this run failed or if there were fewer than 8000 accepted droplets.

Author(s)

Anthony Chiu, anthony.chiu@cruk.manchester.ac.uk

Examples

df <- fullCountsSummary(KRAScountsQS)
fullCopiesSummary(df)


[Package twoddpcr version 1.18.0 Index]