spike_read_counts {spiky}R Documentation

spike-in counts, as a long data.frame

Description

A data.frame with spike-in results from control samples in the manuscript. This maps 1:1 onto dedup using reshape2::melt.

Usage

data(spike_read_counts)

Format

A data.frame object with

frag_grp

the encoded spike contig name: basepairs_CpGs_GCpercent

id

subject from whom cfMeDIP spike reads (column 3) were counted

read_count

read coverage for this spike in this subject (column 2)

Source

This data was created using inst/script/loadDedup.R


[Package spiky version 1.0.0 Index]