testEnrichmentFisher {sesame}R Documentation

testEnrichmentFisher uses Fisher's exact test to estimate the association between two categorical variables.

Description

testEnrichmentFisher uses Fisher's exact test to estimate the association between two categorical variables.

Usage

testEnrichmentFisher(querySet, databaseSet, universeSet)

Arguments

querySet

Vector of probes of interest (e.g., significant probes)

databaseSet

Vectors corresponding to the database set of interest with associated meta data as an attribute to each element.

universeSet

Vector of probes in the universe set containing all of the probes to be considered in the test. (Default: NULL)

Value

A DataFrame with the estimate/statistic, p-value, and name of test for the given results.


[Package sesame version 1.12.9 Index]