sesamePlotIntensVsBetas {sesame} | R Documentation |
Plot Total Signal Intensities vs Beta Values This plot is helpful in revealing the extent of signal background and dye bias.
sesamePlotIntensVsBetas(sdf, mask = TRUE, intens.range = c(5, 15), ...)
sdf |
a |
mask |
whether to remove probes that are masked |
intens.range |
plot range of signal intensity |
... |
additional arguments to smoothScatter |
create a total signal intensity vs beta value plot
sesameDataCache("EPIC") sdf <- # if not done yet sdf <- sesameDataGet('EPIC.1.SigDF') sesamePlotIntensVsBetas(sdf)