getSexInfo {sesame} | R Documentation |
The function takes a SigDF
and returns a vector of three
numerics: the median intensity of chrY probes; the median intensity of
chrX probes; and fraction of intermediate chrX probes. chrX and chrY
probes excludes pseudo-autosomal probes.
getSexInfo(sdf)
sdf |
a |
medianY and medianX, fraction of XCI, methylated and unmethylated X probes, median intensities of auto-chromosomes.
sesameDataCache("EPIC") # if not done yet sdf <- sesameDataGet('EPIC.1.SigDF') getSexInfo(sdf)