getSeed8mers {scanMiR} | R Documentation |
Generates all possible 8mers with 4 consecutive and positioned matches to a given seed.
getSeed8mers(seed, addNs = FALSE)
seed |
The miRNA seed (target DNA sequence), a character vector of length 8 (if of length 7, a "A" will be added on the right) |
addNs |
Logical; whether to include 8mers with one flanking N |
A vector of 1024 8mers.
head(getSeed8mers("ACACTCCA"))