startTreeviz {scTreeViz} | R Documentation |
TreeVizApp
object to manage connection.Start treeviz app and create TreeVizApp
object to manage connection.
startTreeviz( data = NULL, genes = NULL, top_genes = 100, host = "http://epiviz.cbcb.umd.edu/treeviz", register_function = .register_all_treeviz_things, delay = 2L, ... )
data |
TreeViz object to explore |
genes |
(character vector) genes (rownames) to include in heatmap |
top_genes |
(integer) number of top variable genes to include in the heatmap |
host |
(character) host address to launch. |
register_function |
(function) function used to register actions and charts on the treeviz app. |
delay |
(integer) number of seconds to wait for application to load in browser |
... |
additional parameters passed to |
An object of class TreeVizApp
# see package vignette for example usage app <- startTreeviz(non_interactive=TRUE, open_browser=FALSE) app$stop_app()