delete_model {scAnnotatR} | R Documentation |
Delete model/branch from package
delete_model(cell_type, path_to_models = tempdir())
cell_type |
string indicating the cell type of which the model will be removed from package Attention: deletion of a parent model will also delete all of child model. |
path_to_models |
path to the folder containing the list of models in which the to-be-deleted model is. |
no return value, but the model is deleted from database
# load small example dataset data("tirosh_mel80_example") # train a classifier set.seed(123) selected_marker_genes_T = c("CD4", "CD8A", "CD8B") classifier_t <- train_classifier(train_obj = tirosh_mel80_example, assay = 'RNA', slot = 'counts', marker_genes = selected_marker_genes_T, cell_type = "t cells", tag_slot = 'active.ident') # save a classifier to system save_new_model(new_model = classifier_t, path_to_models = tempdir(), include.default = FALSE) # delete classifier from system delete_model("t cells", path_to_models = tempdir())