rfamTextSearchFamilyAccession {rfaRm} | R Documentation |
Searches the Rfam database for entries containing a specified keyword, such as "ribozyme" or "FMN", and returns the accession numbers of the Rfam families containing the keyword in its family ID, summary or description.
rfamTextSearchFamilyAccession(query)
query |
string with the keyword to be searched in the Rfam database. |
A character vector with the accessions of the Rfam families matching the search.
Ioanna Kalvari, Joanna Argasinska, Natalia Quinones-Olvera, Eric P Nawrocki, Elena Rivas, Sean R Eddy, Alex Bateman, Robert D Finn, Anton I Petrov, Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families, Nucleic Acids Research, Volume 46, Issue D1, 4 January 2018, Pages D335–D342, https://doi.org/10.1093/nar/gkx1038
https://docs.rfam.org/en/latest/api.html
# Search Rfam families associated to the keyword "FMN" rfamTextSearchFamilyAccession("FMN")