motif-class {rGADEM}R Documentation

Class "motif"

Description

This object contains contains PWM, motif consensus, motif length and all aligned sequences for a specific motif

Objects from the Class

Objects can be created by calls of the form new("motif_gadem", ...).

Slots

pwm

:PWM results.

consensus

:Sequences consensus.

alignList

:List of sequences alignment.

name

:Name of sequences.

Author(s)

Arnaud Droit arnaud.droit@crchuq.ulaval.ca

See Also

gadem , align, parameters

Examples

showClass("gadem")

[Package rGADEM version 2.42.0 Index]