mergePathways {rBiopaxParser} | R Documentation |
This function merges two given pathways and appends it to the supplied biopax model. The user has to specify a new name for the pathways and can supply ID, ORGANISM and COMMENT properties for the new pathway. If no ID is supplied, a new unique ID is generated. If no organism property is supplied the organism property of the first pathway is re-used. If ORGANISM is NULL the property is not set. Optionally a comment can be added to the pathway.
mergePathways( biopax, pwid1, pwid2, NAME, id = NULL, ORGANISM = "", COMMENT = NULL )
biopax |
A biopax model |
pwid1 |
string. ID of first pathway to merge |
pwid2 |
string. ID of second pathway to merge |
NAME |
string. Name of the new merged pathway |
id |
string. ID for the pathway. If NULL a new ID is generated with prefix "pathway". |
ORGANISM |
string. Organism property of the pathway. By default uses the same organism as the first supplied pathway. If NULL no organism property is set. |
COMMENT |
string. An optional comment |
A biopax model with the merged pathway added.
fkramer