assignColours {qPLEXanalyzer} | R Documentation |
Assigns colours to samples in groups for plotting
assignColours(MSnSetObj, colourBy = "SampleGroup")
MSnSetObj |
MSnSet; an object of class MSnSet |
colourBy |
character: column name from pData(MSnSetObj) to use for coloring samples |
A character vector of colors for samples.
data(human_anno) data(exp3_OHT_ESR1) MSnSet_data <- convertToMSnset(exp3_OHT_ESR1$intensities_qPLEX1, metadata=exp3_OHT_ESR1$metadata_qPLEX1, indExpData=c(7:16), Sequences=2, Accessions=6) sampleColours <- assignColours(MSnSet_data)