exportExpressionSet,proFIAset-method {proFIA}R Documentation

Export proFIAset to ExpressionSet

Description

Eport the data from a proFIAset object as an ExpressionSet object from the Biobase package package.

Usage

## S4 method for signature 'proFIAset'
exportExpressionSet(
  object,
  colgroup = c("mzMed", "scanMin", "scanMax", "nPeaks", "corSampPeakMean",
    "signalOverSolventRatioMean", "timeShifted", "signalOverSolventPvalueMean")
)

Arguments

object

A proFIAset object.

colgroup

Labels corresponding to the column names of the group table.

Value

An ExpressionSet object from the Biobase package

Examples

if(require("plasFIA")&require("Biobase")){
    data(plasSet)
    eset<-exportExpressionSet(plasSet)
    eset
}

[Package proFIA version 1.20.0 Index]