readSMap {nanotatoR} | R Documentation |
Reads SMAP files to extract information from SVMerge
readSMap(smap, smapdata, input_fmt_smap = c("Text", "dataFrame"))
smap |
character. Path to SMAP file. |
smapdata |
dataframe. variable for smap dataset. |
input_fmt_smap |
character. input format for smap text or dataframe. |
Data Frame or text file. Contains the SMAP information.
smapName="NA12878_Q.S_VAP_SVmerge_solo5.txt" smap = system.file("extdata", smapName, package="nanotatoR") readSMap(smap, input_fmt_smap = "Text")