buildrunBNBedFiles {nanotatoR} | R Documentation |
Reads BED files to produce bionano Bed files
buildrunBNBedFiles( bedFile, returnMethod = c("Text", "dataFrame"), outdir, fname )
bedFile |
character. Path to UCSC Bed File. |
returnMethod |
character. Path to output directory. |
outdir |
character. Path to output directory. |
fname |
character. Output File name. |
Data Frame or text file. Contains the gene information.
bedFile <- system.file("extdata", "HomoSapienGRCH19_lift37.bed", package="nanotatoR") bed<-buildrunBNBedFiles(bedFile,returnMethod="dataFrame")